Thomas Newsome

Home » 2020

Yearly Archives: 2020

New PhD Student Opportunity (Now Closed)

Deer Movement and Genetics Project

We are seeking a PhD student to work on an exciting new project: Deer movement and genetics in the Australian Alps (NSW region) to inform pest management

In collaboration with the NSW National Parks and Wildlife Service (NPWS) Environment Trust Deer Project team we are seeking a PhD student to undertake the above project in Kosciuszko National Park (KNP) and adjacent privately managed lands.


Deer are considered pests in NSW and the Environment Trust has granted NPWS $9.2 million over 8 years to develop a cross tenure feral deer management plan, including the development of a cost-effective ‘toolkit’ for application across other areas of NSW. A key component of the project involves tracking the movements and population genetics of deer, as a complementary element to ongoing deer monitoring and integrated pest control trials. 

Deer movement and genetics work:

The deer movement and genetics work will include: GPS collaring of sambar, red and fallow deer, collection of deer DNA and analysis of population structure (primarily sambar and fallow), collection of longitudinal deer behaviour knowledge from public and private land managers, and collection of ongoing observational data using qualitative and quantitative survey techniques.

This work will contribute the main elements of the PhD, which will answer the following:

To what extent can understanding the movements and behaviour of deer be integrated into pest management?

What are the implications for deer management across NSW and nationally?

How can behavioural responses of deer to intensive pest control influence pest management design and effort?

What is the local population structure and degree of interrelatedness of deer populations?

To what extent is there a local / external (inter or intra- district) population component? Can this knowledge be used to better focus management efforts?

Are there invasive source populations of deer affecting pest control efforts?

Are there barrier or conduits to deer movement through the landscape?

Benefits of the PhD project:

Significant in-kind project support via the Environmental Trust and NPWS Deer Project Team, including assistance in field work, equipment (aerial netting gear, GPS units, sampling kits, etc) and other key project costs. The student will be based at The University of Sydney in the School of Life and Environmental Sciences within the Global Ecology Lab supervised by Dr. Thomas Newsome and Dr. Catherine Grueber.

Australian candidates must be competitive to receive stipend support under the Research Training Program (RTP). A variety of scholarships are available for international students. The current RTP stipend rate at The University of Sydney is $35k tax free per annum. A top up scholarship of up to $10k per annum will be provided to a candidate who successfully receives an RTP stipend. If the selected candidate does not receive RTP support, we will consider funding a full scholarship at the rate of $40k per annum.

For more information and to submit an expression of interest, please contact Dr. Thomas Newsome at [lab website:]  

The expression of interest should include a cover letter and CV. Please include details of your degrees (including average marks), relevant work and research experience, field experience in remote locations, publications, and ability to use programs like GIS, statistical packages like R and/or experience undertaking genetic analyses. A shortlist of applicants may be required to interview or meet the project team. A single applicant will be selected for the position and invited to apply for stipend support. The student will enrol in Q3 2021 (enrolment and RTP applications are due to The University of Sydney by 30th March 2021).

Expressions of interest will close 26th February 2021.

ProjectOzScav Updates

In 2018 ProjectOzScav was initiated to investigate the role of carrion in ecological communities in Australia. Specifically, this project:

(1) explores how carrion is used by Australian vertebrates, arthropods and microbes,

(2) determines whether the presence of carrion has cascading impacts on surrounding live prey, and

(3) examines the effects of carrion on soil nutrients and subsequent plant growth surrounding the resource.

Web of interactions we are exploring around carrion as part of ProjectOzScav. Black solid lines indicate use of carrion (or vegetation) by microbes, scavengers or herbivores, as well as the flow of nutrients to soils. Black dashed lines indicate the potential for positive or negative interactions between different trophic groups.

The Initial Field Work

PhD student Emma Spencer led the initial field work for ProjectOzScav, and has monitored vertebrate and insect scavengers, and soil and vegetation responses to the presence of 120 kangaroo carcasses across three study systems in Australia, representing temperate (Blue Mountains), subalpine (Kosciuszko National Park) and desert (Simpson Desert) biomes. This work has been supported by the Australian Pacific Science Foundation, Australian Geographic, The NESP Threatened Species Recovery Hub, Bush Heritage Australia, Emirates One&Only Wolgan Valley, The Holsworth Wildlife Endowment, NSW National Parks and Wildlife Service, and the Australian Academy of Science.

Insights from monitoring the carcasses have been featured in SMH, ABC, Newsweek, DailyMail, TheNewDaily, TheNorthWestStar, KatherineTimes, Batemans Bay Post, ABC news, NZHerald and various other news sources. The work led to blog posts featured by Bush Heritage, and the development of ideas to compost carcasses, especially when carcasses are in excess like after the recent bush fires. The research also helped to inform the debate about plans to ease restrictions on feral deer hunting.

Data collected so far has been incorporated into global analyses on the network structure of vertebrate scavenger assemblages, published in the journal Ecography. Observations of European wasps killing flies and stinging dingoes around carcasses were also published in the journal Food Webs, and featured in The Conversation. Emma is currently writing up the rest of her PhD chapters, and we will post updates when the work is published.

This video shows European wasps congregating around a kangaroo carcass in Kosciuszko National Park. We found that the wasps were killing native blowflies around the carcasses and even stinging dingoes when they attempted to feed.

Unexpected Extreme Weather

Our carcass monitoring work to date coincided with a few extreme weather events. This included a flooding event in the Simpson Desert in 2019. Honours students Patrick Bragato and Zyna Krige are now analysing whether the behaviour, abundance and/or diversity of vertebrate scavenging assemblages around carcasses shifted as a result of the floods, and whether that in turn influences how long carcasses persist in the environment. The work will be based around monitoring vertebrate scavenger use of 40 kangaroo carcasses before the flood, and 40 carcasses after the flood.

Rains and flood waters as shown in this video inundated our study site at Ethabuka Nature Reserve (owned and managed by Bush Heritage) where we were monitoring carcasses. The flood provided a unique opportunity to study how scavenging animals respond to such events.

In the Blue Mountains, our study site in the Wolgan Valley was severely burnt during the 2019/2020 bush fire season. We are now starting to assess whether the bush fires have altered scavenging dynamics and ecosystem processes around carcasses in that region. We monitored vertebrate and insect scavenger use of 80 kangaroo carcasses before the fires, and we are in the process of monitoring vertebrate and insect scavenger use of 40 kangaroo carcasses after the fires.

Aerial shot of post-fire landscape in the Wolgan Valley. Photo credit David Baker.

Other Field Research

Much of our current field research is being undertaken in and around Kosciuszko National Park. This research is supported by the Australian Alps Co-operative Management Program, The Hermon Slade Foundation, NSW National Parks, and local land managers. We are also collaborating on projects with the NSW Environment Trust funded Deer Project.

One project in Kosciuszko National Park is being led by PhD student Stefanie Bonat who is evaluating the ecological effects of animal mass mortality events. Stefanie’s project will monitor a suite of ecosystem responses to animal mass mortality events by simulating them in the field (monitoring lots of carcasses), and by studying what happens across the broader landscape after large scale culling events. A key focus will be the responses by scavengers, soil and vegetation to the presence of large numbers of carcasses in the landscape.

The second project in Kosciuszko National Park, led by Masters students James Vandersteen and Chris Fust, is assessing in more detail the impacts of European wasps on scavenging dynamics (building on the work published in Food Webs), how scavenging dynamics changes through different seasons, and also what happens to carcasses when different scavengers are excluded from accessing them. Previous work in Kosciuszko National Park identified that feral pigs are a dominant scavenger. Honours student Molly Kane is now assessing feral pig behaviours around carcasses, and the factors that influence their rates of scavenging.

Feral pigs inspecting one of our carcass sites.

The Next Steps and Opportunities for Students

As our field work progresses and our results written up, there are plenty of opportunities to join our team either as a volunteer, honours, masters or PhD student.

Some options for lab based volunteer work include (1) scavenging insect ID and sorting, (2) tagging photos of vertebrate scavengers, (3) plant ID’s, and (4) analysis of soil chemistry.

Some options for field based volunteer work include assisting with existing field work in Kosciuszko National Park. We are especially looking for volunteers to assist with field work for the mass mortality project, which will be fully operational in the field from August 2020.

In terms of opportunities for student projects, there is currently scope to add students to the mass mortality project and for the longer term carcass monitoring work we will be conducting in and around Kosciuszko National Park.

We are also looking for students to explore the factors affecting the diversity and abundance of scavenging insect assemblages that we have collected to date, and to explore the longer term impacts of carcasses on insect community assemblages.

For further details about student opportunities, see the Student Opportunities Page.

If you are interested to learn more about ProjectOzScav or whether carcass monitoring might be useful for research, conservation or land management please feel free to contact us directly via the following email:

Photos and interesting findings can be followed on twitter via #ProjectOzScav

Thanks to all our funders and collaborators who have helped to make all this work to date possible.